Publications

Stefan Pfister, Benedikt Beckmann (2020). Systemweite Anreicherung von RNA-Protein-Komplexen. BIOspektrum.

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Anne-Laure Lécrivain, Benedikt Beckmann (2020). Bacterial RNA in extracellular vesicles: A new regulator of host-pathogen interactions?. BBA.

Tom Smith, Eneko Villanueva, Rayner Queiroz, Charlotte Dawson, Mohamed Elzek, Erika Urdaneta, Anne Willis, Benedikt Beckmann, Jeroen Krijgsveld, Kathryn Lilley (2020). Organic phase separation opens up new opportunities to interrogate the RNA-binding proteome. Curr Op Chem Biol.

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Benedikt Beckmann, Sander Granneman (2019). Probing the RNA-Binding Proteome from Yeast to Man: Major Advances and Challenges. Methods Mol Biol.

Erika Urdaneta, Benedikt Beckmann (2019). Fast and unbiased purification of RNA-protein complexes after UV cross-linking. Methods.

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Annkatrin Bressin, Roland Schulte-Sasse, Davide Figini, Erika Urdaneta, Benedikt Beckmann, Annalisa Marsico (2019). TriPepSVM: de novo prediction of RNA-binding proteins based on short amino acid motifs. Nucleic Acids Res.

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Erika Urdaneta, Carlos Vieira-Vieira, Timon Hick, Harm Wessels, Davide Figini, Rebecca Moschall, Jan Medenbach, Uwe Ohler, Sander Granneman, Matthias Selbach, Benedikt Beckmann (2019). Purification of cross-linked RNA-protein complexes by phenol-toluol extraction. Nat Commun.

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Benedikt Beckmann (2017). RNA interactome capture in yeast. Methods.

Benedikt Beckmann, Alfredo Castello, Jan Medenbach (2016). The expanding universe of ribonucleoproteins: of novel RNA-binding proteins and unconventional interactions. Pflugers Arch.

Benedikt Beckmann, Rastislav Horos, Bernd Fischer, Alfredo Castello, Kathrin Eichelbaum, Anne-Marie Alleaume, Tomas Schwarzl, Tomaz Curk, Sabine Foehr, Wolfgang Huber, Jeroen Krijgsveld, Matthias Hentze (2015). The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs. Nat Commun.

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Katharina Kramer, Timo Sachsenberg, Benedikt Beckmann, Saadia Qamar, Kum-Loong Boon, Matthias Hentze, Oliver Kohlbacher, Henning Urlaub (2014). Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins. Nat Medhods.

Marcus Lechner, Astrid Nickel, Stefanie Wehner, Konstantin Riege, Nicolas Wieseke, Benedikt Beckmann, Roland Hartmann, Manja Marz (2014). Genomewide comparison and novel ncRNAs of Aquificales. BMC Genomics.

Benedikt Beckmann, Arnold Grünweller, Roland Hartmann (2014). Northern Blot Detection of Small RNAs. Handbook of RNA Biochemistry.

Alfredo Castello, Bernd Fischer, Katrin Eichelbaum, Rastislav Horos, Benedikt Beckmann, Claudia Strein, Norman Davey, David Humphreys, Thomas Preiss, Lars Steinmetz, Jeroen Krijgsveld, Matthias Hentze (2012). Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell.

Benedikt Beckmann, Philipp Hoch, Manja Marz, Dagmar Willkomm, Margarita Salas, Roland Hartmann (2012). A pRNA-induced structural rearrangement triggers 6S-1 RNA release from RNA polymerase in Bacillus subtilis. EMBO J.

Benedikt Beckmann, Olga Burenina, Philipp Hoch, Elena Kubareva, Cynthia Sharma, Roland Hartmann (2011). In vivo and in vitro analysis of 6S RNA-templated short transcripts in Bacillus subtilis. RNA Biol.

Olivia Merkel, Andrea Beyerle, Benedikt Beckmann, Mengyao Zheng, Roland Hartmann, Tobias Stöger, Thomas Kissel (2011). Polymer-related off-target effects in non-viral siRNA delivery. Biomaterials.

Benedikt Beckmann, Arnold Grünweller, Michael Weber, Roland Hartmann (2010). Northern blot detection of endogenous small RNAs (approximately14 nt) in bacterial total RNA extracts. Nucleic Acids Res.

Iwona Cymerman, Inn Chung, Benedikt Beckmann, Janusz Bujnicki, Gregor Meiss (2008). EXOG, a novel paralog of Endonuclease G in higher eukaryotes. Nucleic Acids Res.